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biomcmc-lib
0.1
low level library for phylogenetic analysis
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Information of a node (binary tree). More...
#include <topology_common.h>

Data Fields | |
| topol_node | up |
| topol_node | right |
| topol_node | left |
| topol_node | sister |
| int | id |
| Parent, children and sister nodes. | |
| int | level |
| int | mid [5] |
| Node ID (values smaller than nleaves indicate leaves) and distance from root. | |
| bool | internal |
| Mapping between nodes and postorder vectors [0,1] (postorder, undone); idx for deep coal [2,3] and losses [4]. | |
| bool | u_done |
| If internal node, TRUE; if leaf, FALSE. | |
| bool | d_done |
| Has the topology up this edge (eq. to node) changed? (needed in likelihood calc) | |
| bipartition | split |
| Has the topology down this edge (eq. to node) changed? (needed in likelihood calc) | |
Information of a node (binary tree).
1.8.13