Here is a list of all documented functions, variables, defines, enums, and typedefs with links to the documentation:

- r -

• raise_topology_flags() : topology_common.h
• randomise_topology() : topology_randomise.h
• read_alignment_from_file() : alignment.h
• read_fasta_alignment_from_file() : alignment.h
• read_nexus_alignment_from_file() : alignment.h
• read_topology_space_from_file() : topology_space.h
• read_topology_space_from_file_with_burnin_thin() : topology_space.h
• reconciliation_gene_tree_reconcile() : reconciliation.h
• remove_nexus_comments() : nexus_common.h
• remove_space_from_string() : nexus_common.h
• reorder_topology_leaves() : topology_common.h