kmerhash.h File Reference

k-mer handling of DNA sequences, with hash transformation More...

#include "alignment.h"

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Data Structures
struct	kmer_params_struct
struct	kmerhash_struct

Typedefs
typedef struct kmer_params_struct *	kmer_params
typedef struct kmerhash_struct *	kmerhash

Functions
kmer_params	new_kmer_params (int mode)
void	del_kmer_params (kmer_params p)
kmerhash	new_kmerhash (int mode)
void	link_kmerhash_to_dna_sequence (kmerhash kmer, char *dna, size_t dna_length)
void	del_kmerhash (kmerhash kmer)
bool	kmerhash_iterator (kmerhash kmer)

Variables
const char *	biomcmc_kmer_class_string []

Detailed Description

k-mer handling of DNA sequences, with hash transformation